BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021B01LP1|AL427712
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1708 0.0
>3x_Contig1753
Length = 23959
Score = 1708 bits (855), Expect = 0.0
Identities = 897/917 (97%), Gaps = 5/917 (0%)
Strand = Plus / Minus
Query: 1 gaaccttccaaatcaaagagacaattraagagggaaaaacgtggtgataaatctcaggta 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16411 gaaccttccaaatcaaagagacaattgaagagggaaaaacgtggtgataaatctcaggta 16352
Query: 61 agataccgatagattaatgttagagaaggggttgtatatactatatccatcatatatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16351 agataccgatagattaatgttagagaaggggttgtatatactatatccatcatatatcta 16292
Query: 121 cgaatacattctcttatatatagagaaagtaagavagaaaggaataatgattgtcattga 180
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 16291 cgaatacattctcttatatatagagaaagtaagaaagaaaggaataatgattgtaattga 16232
Query: 181 mattaagtctaactataataggctctaaatagacaaccaccggctctttcgttaaagcta 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16231 aattaagtctaactataataggctctaaatagacaaccaccggctctttcgttaaagcta 16172
Query: 241 tgtggggcaaatggtgcttaatgttgtttgtgatgtatacgggatattaattcttcgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16171 tgtggggcaaatggtgcttaatgttgtttgtgatgtatacgggatattaattcttcgaaa 16112
Query: 301 tatggtaattatcagmcmgttcttaaattcagttcctgatttttcagacacttagtgtat 360
||||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 16111 tatggtaattatcagacagttattaaattcagttcctgatttttaagacacttagtgtat 16052
Query: 361 agtaacatagcgatgatgctatccaatttagcaacaaccaccattggrtccagtcaatga 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 16051 agtaacatagcgatgatgctatccaatttagcaacaaccaccattggatccagtcaatga 15992
Query: 421 ttggccctttaagttgacgttggacttgtcttcagctctaccattatctttttgttgttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15991 ttggccctttaagttgacgttggacttgtcttcagctctaccattatctttttgttgttt 15932
Query: 481 ggcgacactttccttgatttgcttggtcatgatcaagaaggcctcctcaacgttagaaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15931 ggcgacactttccttgatttgcttggtcatgatcaagaaggcctcctcaacgttagaaga 15872
Query: 541 atctagtgcactggtttcgatgaatggrattccaatagaatctgcgaactctttagcaac 600
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 15871 atctagtgcactggtttcgatgaatggaattccaatagaatctgcgaactctttagcaac 15812
Query: 601 ttcggtgtcaaccaccttcttatctgtcaaatcgttcttgttaccaactagtaacttcaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15811 ttcggtgtcaaccaccttcttatctgtcaaatcgttcttgttaccaactagtaacttcaa 15752
Query: 661 cacaccagctgtaccgaaacggtcgatttcttgcaaccatgtcttgacgttgttgaagga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15751 cacaccagctgtaccgaaacggtcgatttcttgcaaccatgtcttgacgttgttgaagga 15692
Query: 721 ttcttggtctgttacatcgtaaacgataattataccgtgggcacm---gtaagnthagaa 777
|||||||||||||||||||||||||||||||||||||||||||| ||| | ||||
Sbjct: 15691 ttcttggtctgttacatcgtaaacgataattataccgtgggcaccacggta--gtaagaa 15634
Query: 778 gatgtwatagttctgaatctttcctgaccggcagtatcccaaatttgtagcttaacagtt 837
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15633 gatgtaatagttctgaatctttcctgaccggcagtatcccaaatttgtagcttaacagtt 15574
Query: 838 ttgccatctaactcaacagtcttgatcttgaaatcaacaccgatggkggatatatagtcg 897
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15573 ttgccatctaactcaacagtcttgatcttgaaatcaacaccgatggtggatatatagtcg 15514
Query: 898 ttggtataggtatcatc 914
|||||||||||||||||
Sbjct: 15513 ttggtataggtatcatc 15497
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6114
Number of Sequences: 1807
Number of extensions: 6114
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)